Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Elongation factor 1-alpha [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4615 SustainPine v3.0 945
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene53757 SustainPine v3.0 428
• AutoFact: Elongation factor-1 alpha (Fragment) n=5 Tax=Eukaryota RepID=A9QA20_CATRO 9.0e-29
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.626e-31
N-terminus
sp_v3.0_unigene59722 SustainPine v3.0 153
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Rimicaris exoculata RepID=D7F1R6_RIMEX 6.0e-19
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.337e-32
Internal
sp_v3.0_unigene60073 SustainPine v3.0 186
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 4.0e-13
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 8.572e-29
Internal
sp_v3.0_unigene60764 SustainPine v3.0 161
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 4.0e-13
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.224e-36
Internal
sp_v3.0_unigene60766 SustainPine v3.0 129
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 6.0e-11
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.146e-14
Internal
sp_v3.0_unigene60846 SustainPine v3.0 131
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Rimicaris exoculata RepID=D7F1R6_RIMEX 1.0e-10
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.148e-21
Internal
sp_v3.0_unigene61239 SustainPine v3.0 188
• AutoFact: Elongation factor-1 alpha (Fragment) n=5 Tax=Eukaryota RepID=A9QA20_CATRO 2.0e-23
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.282e-26
Internal
sp_v3.0_unigene61376 SustainPine v3.0 213
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Spirogyra sp. FWAC125 RepID=A6MWT3_9VIRI 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene63671 SustainPine v3.0 315
• AutoFact: Elongation factor-1 alpha (Fragment) n=1 Tax=Dysmachus trigonus RepID=B3FBK4_9MUSC 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.191e-36
Internal
sp_v3.0_unigene64614 SustainPine v3.0 200
• AutoFact: Elongation factor 1-alpha n=1 Tax=Loa loa RepID=E1FZJ2_LOALO 1.0e-20
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.282e-36
Internal
sp_v3.0_unigene64855 SustainPine v3.0 278
• AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=Polyphysaceae RepID=A5YKH8_ACEAT 3.0e-29
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 8.447e-20
Internal
sp_v3.0_unigene65498 SustainPine v3.0 226
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 5.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.615e-33
Internal
sp_v3.0_unigene65529 SustainPine v3.0 370
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 2.0e-31
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.807e-31
Internal
sp_v3.0_unigene65756 SustainPine v3.0 114
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-10
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.705e-26
Internal
sp_v3.0_unigene65837 SustainPine v3.0 188
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 4.0e-25
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.65501e-41
Internal
sp_v3.0_unigene65867 SustainPine v3.0 191
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 2.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.026e-36
Internal
sp_v3.0_unigene65901 SustainPine v3.0 143
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.55e-33
Internal
sp_v3.0_unigene73688 SustainPine v3.0 445
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 6.912e-34
Misassembled
sp_v3.0_unigene74031 SustainPine v3.0 226
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 9.0e-16
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.8e-28
Misassembled

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain