Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16942 SustainPine v3.0 1046
AutoFact: small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] ref|NP_973710.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] ref|NP_001078331.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] emb|CAB83134.1| small nuclear ribonucleoprot 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25838 SustainPine v3.0 582
AutoFact: PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like isoform 1 [Apis mellifera] 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein sm d2, putative 4.755e-09
Complete
sp_v3.0_unigene110755 SustainPine v3.0 300
AutoFact: Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Ajellomyces dermatitidis ATCC 18188 RepID=F2TCT1_AJEDE 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein sm d2, putative 4.755e-09
N-terminus
sp_v3.0_unigene126771 SustainPine v3.0 836
AutoFact: small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] ref|NP_973710.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] ref|NP_001078331.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] emb|CAB83134.1| small nuclear ribonucleoprot 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene151436 SustainPine v3.0 306
AutoFact: small ribonucleoprotein particle protein SmD2 [Drosophila melanogaster] ref|XP_001999257.1| GI23171 [Drosophila mojavensis] ref|XP_002038554.1| GM10560 [Drosophila sechellia] ref|XP_002102358.1| GD19551 [Drosophila simulans] sp|Q9VI10.1|SMD2_DROME RecName 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein sm d2, putative 4.755e-09
C-terminus
sp_v3.0_unigene155075 SustainPine v3.0 416
AutoFact: Small nuclear ribonucleoprotein D2-like protein n=6 Tax=Coelomata RepID=Q8MUE3_9BIVA 6.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein sm d2, putative 4.755e-09
Putative Complete
sp_v3.0_unigene155469 SustainPine v3.0 524
AutoFact: Small nuclear ribonucleoprotein Sm D2 n=3 Tax=Sordariomycetes RepID=E9FA82_METAR 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein sm d2, putative 4.755e-09
Putative Complete
sp_v3.0_unigene156043 SustainPine v3.0 391
AutoFact: PREDICTED: similar to Sm D2, partial [Ornithorhynchus anatinus] 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene166929 SustainPine v3.0 371
AutoFact: Small nuclear ribonucleoprotein Sm D2 n=4 Tax=Pleosporineae RepID=B2WJA1_PYRTR 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein sm d2, putative 3.168e-09
N-terminus
sp_v3.0_unigene191064 SustainPine v3.0 447
AutoFact: small nuclear ribonucleoprotein Sm D2 [Neurospora crassa OR74A] gb|EAA31888.2| small nuclear ribonucleoprotein Sm D2 [Neurospora crassa OR74A] 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein sm d2, putative 4.755e-09
Putative Complete
sp_v3.0_unigene206053 SustainPine v3.0 441
AutoFact: PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like isoform 1 [Apis mellifera] 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small nuclear ribonucleoprotein sm d2, putative 4.755e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain