Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 60S ribosomal protein L18-3 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1532 SustainPine v3.0 1137
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene22063 SustainPine v3.0 1019
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene25796 SustainPine v3.0 432
• AutoFact: Ribosomal protein L18 n=1 Tax=Ostreococcus tauri RepID=Q011F6_OSTTA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative Complete
sp_v3.0_unigene27586 SustainPine v3.0 662
• AutoFact: Ribosomal protein L18 n=1 Tax=Monosiga brevicollis RepID=A9UXJ0_MONBE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene79568 SustainPine v3.0 218
• AutoFact: Ribosomal protein L18 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S2V6_OSTLU 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.971e-11
N-terminus
sp_v3.0_unigene127245 SustainPine v3.0 740
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.349e-30
Putative C-terminus
sp_v3.0_unigene141446 SustainPine v3.0 304
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 8.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 4.866e-31
C-terminus
sp_v3.0_unigene151234 SustainPine v3.0 211
• AutoFact: Ribosomal protein L18 n=3 Tax=Blastocystis hominis RepID=D8M2N8_BLAHO 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 7.178e-12
Internal
sp_v3.0_unigene152411 SustainPine v3.0 516
• AutoFact: ACYPI006857 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WU26_ACYPI 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 2.56e-24
Putative N-terminus
sp_v3.0_unigene153323 SustainPine v3.0 415
• AutoFact: Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|R Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene153561 SustainPine v3.0 458
• AutoFact: Ribosomal protein L18 n=1 Tax=Aspergillus oryzae RIB40 RepID=Q2TZ87_ASPOR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.349e-30
N-terminus
sp_v3.0_unigene153824 SustainPine v3.0 385
• AutoFact: Ribosomal protein L18 n=4 Tax=Physcomitrella patens subsp. patens RepID=A9RCW9_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative Complete
sp_v3.0_unigene154404 SustainPine v3.0 397
• AutoFact: Ribosomal protein L18 n=4 Tax=Physcomitrella patens subsp. patens RepID=A9RCW9_PHYPA 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
C-terminus
sp_v3.0_unigene155283 SustainPine v3.0 223
• AutoFact: Ribosomal protein L18 n=1 Tax=Hister sp. APV-2005 RepID=Q4GXG8_9COLE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.09e-35
N-terminus
sp_v3.0_unigene156337 SustainPine v3.0 148
• AutoFact: Ribosomal protein L18 n=1 Tax=Monosiga brevicollis RepID=A9UXJ0_MONBE 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.551e-22
Internal
sp_v3.0_unigene156750 SustainPine v3.0 435
• AutoFact: Ribosomal protein L18 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KP82_PUCGT 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 2.266e-38
Putative N-terminus
sp_v3.0_unigene166249 SustainPine v3.0 240
• AutoFact: 60S ribosomal protein L18 n=2 Tax=Postia placenta Mad-698-R RepID=B8P3W3_POSPM 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Internal
sp_v3.0_unigene188866 SustainPine v3.0 552
• AutoFact: Ribosomal protein l18 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UG10_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative Complete
sp_v3.0_unigene192008 SustainPine v3.0 411
• AutoFact: PREDICTED: similar to ribosomal protein L18e n=1 Tax=Nasonia vitripennis RepID=UPI00015B5688 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.323e-34
N-terminus
sp_v3.0_unigene202605 SustainPine v3.0 415
• AutoFact: Ribosomal protein L18 n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KU89_9ALVE 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 2.399e-38
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain