Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: lysine-specific histone demethylase 1 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3232 SustainPine v3.0 1107
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein LSD1-LIKE 2 1.869e-08
C-terminus
sp_v3.0_unigene23404 SustainPine v3.0 2929
AutoFact: flowering locus D [Arabidopsis thaliana] 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWIRM domain protein 1.919e-12
Complete
sp_v3.0_unigene44968 SustainPine v3.0 147
AutoFact: Amine oxidase, putative n=1 Tax=Ricinus communis RepID=B9SUC7_RICCO 4.0e-08
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein LSD1-LIKE 3 5.331e-09
Internal
sp_v3.0_unigene81413 SustainPine v3.0 125
AutoFact: Amine oxidase, putative n=1 Tax=Ricinus communis RepID=B9SUC7_RICCO 2.0e-09
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene93905 SustainPine v3.0 621
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 5.00264e-43
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Flavin-containing amine oxidase domain-containing protein, putative 3.922e-09
Putative C-terminus
sp_v3.0_unigene94831 SustainPine v3.0 455
AutoFact: flowering locus D [Arabidopsis thaliana] 4.0e-09
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein LSD1-LIKE 1 3.168e-09
Internal
sp_v3.0_unigene103859 SustainPine v3.0 427
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein LSD1-LIKE 2 1.869e-08
Internal
sp_v3.0_unigene105495 SustainPine v3.0 207
AutoFact: pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase 9.0e-15
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein LSD1-LIKE 2 1.514e-08
Internal
sp_v3.0_unigene112916 SustainPine v3.0 455
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 3.0e-10
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein LSD1-LIKE 3 2.783e-09
C-terminus
sp_v3.0_unigene118092 SustainPine v3.0 171
AutoFact: pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase 3.0e-11
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein LSD1-LIKE 2 1.273e-08
Internal
sp_v3.0_unigene162648 SustainPine v3.0 177
AutoFact: RecName: Full=Lysine-specific histone demethylase 1 homolog 3; AltName: Full=Flavin-containing amine oxidase domain-containing protein 3; AltName: Full=Protein FLOWERING LOCUS D-LIKE; AltName: Full=Protein LSD1-LIKE 3 emb|CAH68056.1| B0103C08-B0602B01.13 3.0e-12
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Flavin-containing amine oxidase domain-containing protein, putative 5.237e-09
Internal
sp_v3.0_unigene168310 SustainPine v3.0 229
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 5.0e-29
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWIRM domain protein 2.407e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain