Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RAB GTPase-like protein G3C [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3801 SustainPine v3.0 1707
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RRT7_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene26042 SustainPine v3.0 1491
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RRT7_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene26063 SustainPine v3.0 401
• AutoFact: Ras family GTP-ase, putative n=1 Tax=Plasmodium chabaudi RepID=Q4Y8B5_PLACH 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene78872 SustainPine v3.0 274
• AutoFact: Rab-type small GTP-binding protein (Fragment) n=2 Tax=fabids RepID=Q9SXT6_CICAR 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 7.349e-18
Misassembled
sp_v3.0_unigene150495 SustainPine v3.0 336
• AutoFact: GTP-binding protein ypt7 n=7 Tax=Onygenales RepID=C1GEC2_PARBD 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene152289 SustainPine v3.0 503
• AutoFact: Zgc:100918 n=6 Tax=Clupeocephala RepID=Q641M4_DANRE 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 1.056e-23
C-terminus
sp_v3.0_unigene188912 SustainPine v3.0 499
• AutoFact: Putative Ras-protein Rab7 n=1 Tax=Metarhizium anisopliae ARSEF 23 RepID=E9EL24_METAR 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab7/RabG-family small GTPase 2.751e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain