Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: H/ACA ribonucleoprotein complex subunit 2-like protein [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17546 SustainPine v3.0 1171
AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17950 SustainPine v3.0 718
AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.106e-08
C-terminus
sp_v3.0_unigene20379 SustainPine v3.0 1184
AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene27862 SustainPine v3.0 515
AutoFact: Ribosomal protein L7Ae/L30e/S12e/Gadd4, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P0D1_PHYIT 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Complete
sp_v3.0_unigene151661 SustainPine v3.0 401
AutoFact: Ribosomal protein L7Ae/L30e/S12e/Gadd4, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P0D1_PHYIT 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene152034 SustainPine v3.0 525
AutoFact: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_1 n=1 Tax=Blastocystis hominis RepID=D8LXA9_BLAHO 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Complete
sp_v3.0_unigene152461 SustainPine v3.0 457
AutoFact: H/aca ribonucleoprotein complex subunit 2-like protein n=2 Tax=Ictalurus RepID=E3TC44_9TELE 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os06g0274200 protein 9.747e-06
C-terminus
sp_v3.0_unigene153069 SustainPine v3.0 306
AutoFact: ribosomal protein L7Ae [Dictyostelium discoideum AX4] gb|EAL62561.1| ribosomal protein L7Ae [Dictyostelium discoideum AX4] 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene153270 SustainPine v3.0 383
AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
C-terminus
sp_v3.0_unigene153969 SustainPine v3.0 393
AutoFact: PREDICTED: similar to nucleolar protein family A, member 2 (H/ACA small nucleolar RNPs) n=1 Tax=Ciona intestinalis RepID=UPI00006A7302 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
C-terminus
sp_v3.0_unigene154780 SustainPine v3.0 219
AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Internal
sp_v3.0_unigene155385 SustainPine v3.0 352
AutoFact: Nucleolar protein, small subunit of H/ACA snoRNPs n=3 Tax=Chlamydomonadales RepID=A8JB67_CHLRE 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene183084 SustainPine v3.0 517
AutoFact: Nucleolar protein family A n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGX1_9EUKA 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Complete
sp_v3.0_unigene186056 SustainPine v3.0 646
AutoFact: H/ACA ribonucleoprotein complex subunit 2 [Oryza sativa Indica Group] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain