Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: helicase SWR1 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene14394 SustainPine v3.0 638
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 2.667e-11
C-terminus
sp_v3.0_unigene62720 SustainPine v3.0 292
AutoFact: PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase n=1 Tax=Vitis vinifera RepID=UPI0001983E18 1.0e-27
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 6.904e-09
Internal
sp_v3.0_unigene73703 SustainPine v3.0 470
AutoFact: RecName: Full=Helicase SWR1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.257e-38
Internal
sp_v3.0_unigene76350 SustainPine v3.0 370
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Aspergillus oryzae RIB40 RepID=Q2U236_ASPOR 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 1.003e-08
Internal
sp_v3.0_unigene102819 SustainPine v3.0 888
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SBN6_RICCO 0.0
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 5.596e-09
Internal
sp_v3.0_unigene107806 SustainPine v3.0 277
AutoFact: PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase n=1 Tax=Vitis vinifera RepID=UPI0001983E18 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 3.006e-09
Internal
sp_v3.0_unigene107997 SustainPine v3.0 196
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 1.0e-30
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 6.042e-09
Internal
sp_v3.0_unigene148935 SustainPine v3.0 301
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 1.0e-10
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene152719 SustainPine v3.0 416
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S832_PHYPA 5.0e-11
FL-Next: tr=Putative photoperiod independent early flowering1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene167491 SustainPine v3.0 122
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SBN6_RICCO 3.0e-09
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 1.463e-09
Internal
sp_v3.0_unigene167549 SustainPine v3.0 261
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 2.99878e-43
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 6.505e-09
Internal
sp_v3.0_unigene199563 SustainPine v3.0 292
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GF82_POPTR 4.0e-21
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain