Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: pentatricopeptide repeat-containing protein [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene47263 SustainPine v3.0 307
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S7P2_RICCO 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.232e-06
Putative N-terminus
sp_v3.0_unigene52352 SustainPine v3.0 256
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g68930 gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana] gb|AEE34864.1| pen 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene60422 SustainPine v3.0 431
• AutoFact: Pentatricopeptide repeat protein 43 n=1 Tax=Funaria hygrometrica RepID=F5CAD7_FUNHY 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61152 SustainPine v3.0 342
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g68930 gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana] gb|AEE34864.1| pen 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62210 SustainPine v3.0 295
• AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62290 SustainPine v3.0 272
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g68930 gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana] gb|AEE34864.1| pen 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene62448 SustainPine v3.0 268
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g68930 gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana] gb|AEE34864.1| pen 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65151 SustainPine v3.0 159
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g68930 gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana] gb|AEE34864.1| pen 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene66999 SustainPine v3.0 194
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 2.393e-08
Internal
sp_v3.0_unigene68476 SustainPine v3.0 319
• AutoFact: pfam01535, PPR, PPR repeat 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene69125 SustainPine v3.0 237
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RRD9_RICCO 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72579 SustainPine v3.0 274
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene73626 SustainPine v3.0 183
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74097 SustainPine v3.0 255
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74934 SustainPine v3.0 145
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g68930 gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana] gb|AEE34864.1| pen 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene109218 SustainPine v3.0 455
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g68930 gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana] gb|AEE34864.1| pen 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene148498 SustainPine v3.0 186
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain