Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: MADS-box protein SOC1 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4424 SustainPine v3.0 891
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 1.935e-17
Putative Complete
sp_v3.0_unigene4481 SustainPine v3.0 868
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 5.939e-30
Complete
sp_v3.0_unigene10189 SustainPine v3.0 542
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 4.312e-21
N-terminus
sp_v3.0_unigene12228 SustainPine v3.0 1314
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AGAMOUS-like protein 4.151e-19
Putative Complete
sp_v3.0_unigene16414 SustainPine v3.0 595
AutoFact: putative MADS domain transcription factor GGM1 [Gnetum gnemon] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 4.585e-15
N-terminus
sp_v3.0_unigene16654 SustainPine v3.0 1055
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box transcription factor 8.35e-22
Complete
sp_v3.0_unigene17959 SustainPine v3.0 1006
AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box transcription factor 1.86e-21
Complete
sp_v3.0_unigene30653 SustainPine v3.0 884
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 3.055e-19
Complete
sp_v3.0_unigene32645 SustainPine v3.0 877
AutoFact: putative MADS box transcription factor PrMADS5 [Pinus radiata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 4.213e-21
Putative Complete
sp_v3.0_unigene33014 SustainPine v3.0 511
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 7.0e-25
FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: MADS-box protein 1.03e-19
N-terminus
sp_v3.0_unigene35107 SustainPine v3.0 912
AutoFact: MADS-domain transcription factor dal3 variant 2 n=1 Tax=Picea abies RepID=E1B4K8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 2.458e-15
N-terminus
sp_v3.0_unigene37009 SustainPine v3.0 798
AutoFact: Putative MADS box transcription factor PrMADS5 n=1 Tax=Pinus radiata RepID=O24489_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS5; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Putative MADS box transcription factor PrMADS5 0.0
Complete
sp_v3.0_unigene37671 SustainPine v3.0 1065
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Putative MADS box transcription factor PrMADS9 0.0
Complete
sp_v3.0_unigene44820 SustainPine v3.0 907
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 3.055e-19
Complete
sp_v3.0_unigene54258 SustainPine v3.0 383
AutoFact: putative MADS box transcription factor PrMADS8 [Pinus radiata] 0.0
FL-Next: tr=DAL3 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: AGAMOUS-like protein 3.432e-30
Internal
sp_v3.0_unigene58348 SustainPine v3.0 234
AutoFact: Putative MADS domain transcription factor GGM1 n=1 Tax=Gnetum gnemon RepID=Q9XGK6_GNEGN 2.0e-23
FL-Next: tr=DAL3 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: MADS-box protein 3.141e-19
N-terminus
sp_v3.0_unigene60706 SustainPine v3.0 292
AutoFact: MADS-box transcription factor FBP4 n=1 Tax=Petunia x hybrida RepID=Q9ATF3_PETHY 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MADS-box protein 3.668e-06
Internal
sp_v3.0_unigene64328 SustainPine v3.0 193
AutoFact: MADS-box transcription factor GbMADS3 n=1 Tax=Ginkgo biloba RepID=Q58A80_GINBI 3.0e-19
FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Internal
sp_v3.0_unigene95319 SustainPine v3.0 790
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AGAMOUS-like protein 2.888e-21
Complete
sp_v3.0_unigene99444 SustainPine v3.0 553
AutoFact: putative MADS-box protein [Cucumis sativus] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain