Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: E3 ubiquitin-protein ligase RGLG2 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8536 SustainPine v3.0 2183
AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11034 SustainPine v3.0 2622
AutoFact: Copine I-like protein n=4 Tax=Oryza RepID=Q6YYC5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12465 SustainPine v3.0 2083
AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene18391 SustainPine v3.0 2238
AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20847 SustainPine v3.0 676
AutoFact: Copine III-like protein (Fragment) n=1 Tax=Picea abies RepID=B2KZF7_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 9.771e-21
C-terminus
sp_v3.0_unigene47756 SustainPine v3.0 2041
AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene102392 SustainPine v3.0 1447
AutoFact: pfam07002, Copine, Copine 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 1.09e-20
N-terminus
sp_v3.0_unigene127964 SustainPine v3.0 882
AutoFact: Copine I-like protein n=4 Tax=Oryza RepID=Q6YYC5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 9.041e-21
N-terminus
sp_v3.0_unigene132488 SustainPine v3.0 472
AutoFact: copine-like protein [Oryza sativa Japonica Group] 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene137152 SustainPine v3.0 425
AutoFact: Copine III-like protein (Fragment) n=1 Tax=Picea abies RepID=B2KZF7_PICAB 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 2.807e-07
C-terminus
sp_v3.0_unigene143661 SustainPine v3.0 330
AutoFact: RING-finger protein n=1 Tax=Capsicum annuum RepID=Q08ET6_CAPAN 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 8.841e-21
Internal
sp_v3.0_unigene153035 SustainPine v3.0 204
AutoFact: copine-like protein [Oryza sativa Japonica Group] 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159082 SustainPine v3.0 314
AutoFact: pfam07002, Copine, Copine 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 6.874e-21
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain