Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Topless-related protein 3 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene13079 SustainPine v3.0 1635
AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 2.811e-09
Putative Complete
sp_v3.0_unigene21644 SustainPine v3.0 555
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene28300 SustainPine v3.0 1100
AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] 0.0
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 7.856e-12
C-terminus
sp_v3.0_unigene40428 SustainPine v3.0 508
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q17U56_SOLBU 5.0e-25
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 3.045e-07
Internal
sp_v3.0_unigene58056 SustainPine v3.0 297
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.509e-09
Internal
sp_v3.0_unigene66853 SustainPine v3.0 283
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q7XA22_SOLBU 6.0e-22
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 7.727e-08
Internal
sp_v3.0_unigene69184 SustainPine v3.0 245
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 9.462e-06
Internal
sp_v3.0_unigene72615 SustainPine v3.0 227
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 3.0e-12
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene79026 SustainPine v3.0 242
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene81216 SustainPine v3.0 262
AutoFact: contains similarity to Pfam family PF0040 - WD domain, G-beta repeat; score=10.8, E=3.2, N-2 [Arabidopsis thaliana] 8.0e-20
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 9.401e-10
Internal
sp_v3.0_unigene146937 SustainPine v3.0 489
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RFF4_RICCO 2.0e-10
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene189331 SustainPine v3.0 654
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.093e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain