Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene126 SustainPine v3.0 1931
AutoFact: paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 2 gb|AED92105.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 2.932e-16
Putative Complete
sp_v3.0_unigene29770 SustainPine v3.0 1052
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HLV3_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 1.62e-16
Putative Complete
sp_v3.0_unigene38748 SustainPine v3.0 1859
AutoFact: paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 2 gb|AED92105.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 5.589e-16
Putative Complete
sp_v3.0_unigene39275 SustainPine v3.0 396
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 9.484e-17
C-terminus
sp_v3.0_unigene63700 SustainPine v3.0 260
AutoFact: WRKY domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJF7_MALDO 5.0e-22
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SIN3 component, histone deacetylase complex 2.495e-09
Internal
sp_v3.0_unigene95862 SustainPine v3.0 314
AutoFact: Paired amphipathic helix repeat-containing protein / transcription regulator-related n=1 Tax=Musa acuminata RepID=Q1EPA1_MUSAC 2.0e-22
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 5.474e-17
Internal
sp_v3.0_unigene158920 SustainPine v3.0 240
AutoFact: Paired amphipathic helix protein Sin3-like 2 n=3 Tax=Arabidopsis RepID=SNL2_ARATH 2.0e-14
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain