Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat (TPR)-like superfamily protein chr2:14249608-14251791 FORWARD LENGTH=727

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene16642 SustainPine v3.0 601
• AutoFact: PPR-repeat protein-like n=3 Tax=Oryza sativa RepID=Q94E87_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.926e-09
Internal
sp_v3.0_unigene47566 SustainPine v3.0 288
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SBK1_RICCO 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.44e-18
Putative N-terminus
sp_v3.0_unigene50530 SustainPine v3.0 232
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680 gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana] gb|AEC08868.1| pentatricopeptide repe 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene52267 SustainPine v3.0 429
• AutoFact: B1358B12.23 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q6MWE3_ORYSJ 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.746e-29
Putative N-terminus
sp_v3.0_unigene53032 SustainPine v3.0 322
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S8W1_RICCO 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 7.255e-06
N-terminus
sp_v3.0_unigene61869 SustainPine v3.0 261
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680 gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana] gb|AEC08868.1| pentatricopeptide repe 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63043 SustainPine v3.0 170
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64998 SustainPine v3.0 213
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680 gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana] gb|AEC08868.1| pentatricopeptide repe 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65119 SustainPine v3.0 209
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S2A2_RICCO 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene75553 SustainPine v3.0 289
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680 gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana] gb|AEC08868.1| pentatricopeptide repe 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: cDNA clone:J023104D09, full insert sequence 7.31e-06
Internal
sp_v3.0_unigene107410 SustainPine v3.0 380
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680 gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana] gb|AEC08868.1| pentatricopeptide repe 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene111751 SustainPine v3.0 319
• AutoFact: PPR-repeat protein-like [Oryza sativa Japonica Group] gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene123777 SustainPine v3.0 336
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680 gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana] gb|AEC08868.1| pentatricopeptide repe 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene125426 SustainPine v3.0 234
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680 gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana] gb|AEC08868.1| pentatricopeptide repe 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene129088 SustainPine v3.0 341
• AutoFact: PPR-repeat protein-like [Oryza sativa Japonica Group] gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene130988 SustainPine v3.0 443
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680 gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana] gb|AEC08868.1| pentatricopeptide repe 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene132834 SustainPine v3.0 402
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680 gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana] gb|AEC08868.1| pentatricopeptide repe 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene137424 SustainPine v3.0 216
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680 gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana] gb|AEC08868.1| pentatricopeptide repe 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain