Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATPRP40C, PRP40C pre-mRNA-processing protein 40C chr3:6891228-6897227 FORWARD LENGTH=835

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3871 SustainPine v3.0 3218
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Pre-mRNA-processing protein 40C; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene93598 SustainPine v3.0 1481
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 3.9937e-43
FL-Next: sp=Pre-mRNA-processing protein 40C; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene93723 SustainPine v3.0 893
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 3.0e-34
FL-Next: sp=Pre-mRNA-processing protein 40C; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene107539 SustainPine v3.0 642
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 5.0e-30
FL-Next: sp=Pre-mRNA-processing protein 40C; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene184665 SustainPine v3.0 313
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 6.0e-18
FL-Next: sp=Pre-mRNA-processing protein 40C; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pre-mRNA-processing protein PRP40, putative 4.386e-06
Internal
sp_v3.0_unigene210126 SustainPine v3.0 285
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 5.0e-11
FL-Next: sp=Pre-mRNA-processing protein 40C; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pre-mRNA-processing protein PRP40, putative 6.823e-06
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain