Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: ATSGP1, SGP1 Ras-related small GTP-binding family protein chr5:22276611-22278328 REVERSE LENGTH=288

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene28497 SustainPine v3.0 718
AutoFact: Os07g0522900 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0D5Z4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene77873 SustainPine v3.0 407
AutoFact: small monomeric GTPase [Coprinopsis cinerea okayama7#130] gb|EAU86797.1| small monomeric GTPase [Coprinopsis cinerea okayama7#130] 0.0
FL-Next: tr=Septum-promoting GTP-binding protein 1; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
Sma3: SGP1 monomeric G-protein 6.335e-06
Misassembled
sp_v3.0_unigene151368 SustainPine v3.0 400
AutoFact: SPG1, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus RepID=D7G5G8_ECTSI 0.0
FL-Next: tr=SPG1, Ras superfamily GTPase; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene156022 SustainPine v3.0 452
AutoFact: Small GTPase n=4 Tax=Dictyosteliida RepID=D3BQR0_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene159002 SustainPine v3.0 221
AutoFact: Small GTPase n=4 Tax=Dictyosteliida RepID=D3BQR0_POLPA 1.0e-32
FL-Next: sp=Ras-related protein RABA6a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain