Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Translation elongation factor EF1B/ribosomal protein S6 family protein chr2:7872636-7873713 FORWARD LENGTH=231

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene29456 SustainPine v3.0 1289
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30737 SustainPine v3.0 727
• AutoFact: Elongation factor 1-beta', putative n=1 Tax=Pediculus humanus corporis RepID=E0VE53_PEDHC 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 1.718e-14
Complete
sp_v3.0_unigene151190 SustainPine v3.0 317
• AutoFact: Elongation factor 1-delta n=1 Tax=Anoplopoma fimbria RepID=C3KI18_ANOFI 1.0e-31
• FL-Next: tr=Putative elongation factor; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Elongation factor 1-beta, putative 3.922e-09
Internal
sp_v3.0_unigene153472 SustainPine v3.0 266
• AutoFact: Elongation factor 1-beta', putative n=1 Tax=Pediculus humanus corporis RepID=E0VE53_PEDHC 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene154244 SustainPine v3.0 516
• AutoFact: Elongation factor 1-beta n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SIE9_VERA1 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 1.629e-14
C-terminus
sp_v3.0_unigene154821 SustainPine v3.0 398
• AutoFact: similar to GenBank Accession Number AF103726 peptide elongation factor 1-beta in Gallus gallus [Schistosoma japonicum] emb|CAX76775.1| eukaryotic translation elongation factor 1 beta 2 [Schistosoma japonicum] emb|CAX76776.1| eukaryotic translation elongat 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.264e-14
Putative C-terminus
sp_v3.0_unigene154899 SustainPine v3.0 488
• AutoFact: similar to GenBank Accession Number AF103726 peptide elongation factor 1-beta in Gallus gallus [Schistosoma japonicum] emb|CAX76775.1| eukaryotic translation elongation factor 1 beta 2 [Schistosoma japonicum] emb|CAX76776.1| eukaryotic translation elongat 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.22e-14
C-terminus
sp_v3.0_unigene158901 SustainPine v3.0 531
• AutoFact: Elongation factor 1-beta n=4 Tax=Xenopus RepID=EF1B_XENTR 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-delta 1 2.22e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain