Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: ATEXPA17, ATEXP17, ATHEXP ALPHA 1.13, EXPA17 expansin A17 chr4:700653-701527 FORWARD LENGTH=255

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene28217 SustainPine v3.0 590
AutoFact: Putative expansin-A17 n=2 Tax=Arabidopsis RepID=EXP17_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene42333 SustainPine v3.0 913
AutoFact: Expansin 1 n=1 Tax=Linum usitatissimum RepID=A9UJY1_LINUS 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene49341 SustainPine v3.0 381
AutoFact: Putative expansin-A17 n=2 Tax=Arabidopsis RepID=EXP17_ARATH 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene69602 SustainPine v3.0 186
AutoFact: Alpha-expansin 12, putative n=1 Tax=Ricinus communis RepID=B9SNN6_RICCO 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene184153 SustainPine v3.0 180
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 3.0e-10
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 1.49659e-42
N-terminus
sp_v3.0_unigene185832 SustainPine v3.0 291
AutoFact: Putative expansin-A17 n=2 Tax=Arabidopsis RepID=EXP17_ARATH 2.0e-20
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain