Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Rhamnogalacturonate lyase family protein chr1:3214237-3217386 REVERSE LENGTH=617

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4385 SustainPine v3.0 814
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Lyase, putative 2.067e-27
N-terminus
sp_v3.0_unigene73243 SustainPine v3.0 228
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 1.903e-08
Internal
sp_v3.0_unigene75636 SustainPine v3.0 480
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 2.0e-40
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Lyase, putative 4.428e-23
Internal
sp_v3.0_unigene76291 SustainPine v3.0 220
AutoFact: Rhamnogalacturonate lyase family protein [Arabidopsis thaliana] emb|CAB45078.1| LG27/30-like gene [Arabidopsis thaliana] emb|CAB79353.1| LG27/30-like gene [Arabidopsis thaliana] gb|AEE84903.1| Rhamnogalacturonate lyase family protein [Arabidopsis thaliana 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 7.056e-22
Internal
sp_v3.0_unigene117686 SustainPine v3.0 382
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AAD15570.1| unknown protein [Arabidopsis thaliana] gb|AEC07329.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 2.223e-29
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain