Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transducin/WD40 repeat-like superfamily protein chr5:26466348-26468201 FORWARD LENGTH=331

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene39394 SustainPine v3.0 840
• AutoFact: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SRV1_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Set1 complex component swd2 1.724e-12
C-terminus
sp_v3.0_unigene68316 SustainPine v3.0 181
• AutoFact: WD repeat protein-like [Arabidopsis thaliana] 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene70065 SustainPine v3.0 327
• AutoFact: WD repeat protein-like [Arabidopsis thaliana] 4.0e-08
• FL-Next: tr=Putative uncharacterized protein Sb09g027180; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
N-terminus
sp_v3.0_unigene71816 SustainPine v3.0 296
• AutoFact: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTB1_PHYPA 3.0e-19
• FL-Next: tr=Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 4.916e-10
Internal
sp_v3.0_unigene99903 SustainPine v3.0 804
• AutoFact: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SRV1_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Set1 complex component swd2 1.658e-12
C-terminus
sp_v3.0_unigene104572 SustainPine v3.0 595
• AutoFact: WD repeat protein-like [Arabidopsis thaliana] 5.04467e-44
• FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Set1 complex component swd2 1.792e-12
Putative N-terminus
sp_v3.0_unigene115713 SustainPine v3.0 316
• AutoFact: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTB1_PHYPA 2.0e-14
• FL-Next: tr=Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene138041 SustainPine v3.0 499
• AutoFact: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTB1_PHYPA 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Set1 complex component swd2 1.658e-12
C-terminus
sp_v3.0_unigene196026 SustainPine v3.0 194
• AutoFact: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SRV1_PHYPA 1.0e-16
• FL-Next: tr=Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 2.643e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain