Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ORF102 RNA-directed DNA polymerase (reverse transcriptase) chrM:310514-310882 FORWARD LENGTH=122

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene51373 SustainPine v3.0 683
• AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=Q9ZQM0_ARATH 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Putative non-LTR retroelement reverse transcriptase 4.591e-36
Putative Complete
sp_v3.0_unigene57647 SustainPine v3.0 364
• AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=O22220_ARATH 5.0e-22
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene66583 SustainPine v3.0 271
• AutoFact: RVT_1 domain containing protein 3.0e-07
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene67700 SustainPine v3.0 244
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) n=1 Tax=Medicago truncatula RepID=A2Q168_MEDTR 1.0e-09
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene116742 SustainPine v3.0 332
• AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=O22220_ARATH 4.0e-20
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene139481 SustainPine v3.0 387
• AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=O22220_ARATH 2.0e-22
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene161001 SustainPine v3.0 331
• AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=O22220_ARATH 9.0e-18
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene163054 SustainPine v3.0 306
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) n=1 Tax=Medicago truncatula RepID=A2Q168_MEDTR 4.0e-15
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain