Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RDR2, SMD1 RNA-dependent RNA polymerase 2 chr4:6780522-6784390 FORWARD LENGTH=1133

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene138 SustainPine v3.0 3993
AutoFact: putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] 0.0
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase 3.257e-20
Complete
sp_v3.0_unigene49930 SustainPine v3.0 292
AutoFact: RNA-directed RNA polymerase n=6 Tax=Solanum RepID=Q9ZR58_SOLLC 1.0e-27
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase, putative 2.497e-16
Internal
sp_v3.0_unigene58287 SustainPine v3.0 439
AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IEP4_POPTR 9.0e-38
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase 8.911e-17
Internal
sp_v3.0_unigene61182 SustainPine v3.0 170
AutoFact: RNA-dependent RNA polymerase 2 n=2 Tax=Arabidopsis RepID=RDR2_ARATH 1.0e-14
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase 1.492e-20
Internal
sp_v3.0_unigene111538 SustainPine v3.0 266
AutoFact: RNA-directed RNA polymerase n=6 Tax=Solanum RepID=Q9ZR58_SOLLC 6.0e-25
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA-directed RNA polymerase, putative 2.497e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain