Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATHMG, SSRP1, NFD, HMG high mobility group chr3:10784954-10788498 FORWARD LENGTH=646

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3002 SustainPine v3.0 777
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Recombination signal sequence recognition protein 1 4.994e-17
Putative Complete
sp_v3.0_unigene3864 SustainPine v3.0 2466
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
• FL-Next: sp=FACT complex subunit SSRP1; Vicia faba (Broad bean) (Faba vulgaris). 0.0
• Sma3: Recombination signal sequence recognition protein 1 5.23e-17
Complete
sp_v3.0_unigene3891 SustainPine v3.0 1848
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
• FL-Next: sp=FACT complex subunit SSRP1; Vicia faba (Broad bean) (Faba vulgaris). 0.0
• Sma3: Recombination signal sequence recognition protein 1 5.599e-17
N-terminus
sp_v3.0_unigene16838 SustainPine v3.0 686
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Recombination signal sequence recognition protein 1 4.994e-17
Putative Complete
sp_v3.0_unigene18806 SustainPine v3.0 673
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Recombination signal sequence recognition protein 1 4.994e-17
Internal
sp_v3.0_unigene55918 SustainPine v3.0 383
• AutoFact: Nucleosome binding protein n=7 Tax=Ajellomyces RepID=C5G7F6_AJEDR 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72604 SustainPine v3.0 161
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 1.0e-13
• FL-Next: sp=FACT complex subunit SSRP1; Vicia faba (Broad bean) (Faba vulgaris). 0.0
• Sma3: Recombination signal sequence recognition protein 1 9.034e-18
Internal
sp_v3.0_unigene74010 SustainPine v3.0 442
• AutoFact: Non-histone chromosomal protein 6 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NJM4_COPC7 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157303 SustainPine v3.0 264
• AutoFact: Non-histone chromosomal protein 6 n=3 Tax=Ustilaginaceae RepID=NHP6_USTMA 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Structure specific recognition protein 1 2.437e-06
Internal
sp_v3.0_unigene160203 SustainPine v3.0 336
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 1.0e-33
• FL-Next: sp=FACT complex subunit SSRP1; Vicia faba (Broad bean) (Faba vulgaris). 0.0
• Sma3: Recombination signal sequence recognition protein 1 4.031e-17
Internal
sp_v3.0_unigene166612 SustainPine v3.0 338
• AutoFact: RecName: Full=Non-histone chromosomal protein 6 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene198871 SustainPine v3.0 526
• AutoFact: Non-histone chromosomal protein 6 n=4 Tax=Pleosporineae RepID=B2WEL1_PYRTR 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: High mobility group protein 4.467e-09
Putative Complete
sp_v3.0_unigene200523 SustainPine v3.0 725
• AutoFact: RecName: Full=Non-histone chromosomal protein 6 gb|AAF06350.1|AF196333_1 nonhistone protein 6 [Candida albicans] gb|EEQ45306.1| conserved hypothetical protein [Candida albicans WO-1] 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain