Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RHC1A RING-H2 finger C1A chr2:17043642-17044628 FORWARD LENGTH=328

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene71472 SustainPine v3.0 260
AutoFact: PREDICTED: similar to thioredoxin-related protein isoform 1 n=1 Tax=Vitis vinifera RepID=UPI0001983C70 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102585 SustainPine v3.0 597
AutoFact: RHC1A n=2 Tax=Zea mays RepID=B6T839_MAIZE 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 1.633e-12
C-terminus
sp_v3.0_unigene164787 SustainPine v3.0 362
AutoFact: ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973651.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973652.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] gb|AAB86443.1| expressed protein [Arabidopsi 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 1.545e-16
Internal
sp_v3.0_unigene208578 SustainPine v3.0 416
AutoFact: ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973651.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973652.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] gb|AAB86443.1| expressed protein [Arabidopsi 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 1.489e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain