Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 4CL2, AT4CL2 4-coumarate:CoA ligase 2 chr3:7454497-7457314 REVERSE LENGTH=556

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8540 SustainPine v3.0 1990
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
FL-Next: sp=4-coumarate--CoA ligase; Pinus taeda (Loblolly pine). 0.0
Sma3: 4-coumaroyl-CoA synthase 0.0
Complete
sp_v3.0_unigene31876 SustainPine v3.0 1998
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 0.0
Putative Complete
sp_v3.0_unigene64393 SustainPine v3.0 152
AutoFact: 4-coumarate:coenzyme A ligase 3 n=4 Tax=Funariaceae RepID=B7SBA1_PHYPA 3.0e-12
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 7.28675e-44
Internal
sp_v3.0_unigene127584 SustainPine v3.0 942
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 3.697e-38
Misassembled
sp_v3.0_unigene135683 SustainPine v3.0 451
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 1.0e-19
FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: 4-coumarate:CoA ligase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain