Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNEE/G RNAse E/G-like chr2:1474961-1480014 FORWARD LENGTH=1001

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10978 SustainPine v3.0 1298
AutoFact: RNAse E/G-like protein n=8 Tax=Arabidopsis RepID=F4IV66_ARATH 0.0
FL-Next: sp=Ribonuclease E homolog; Porphyra purpurea. Plastid; Chloroplast. 0.0
Sma3: Putative ribonuclease E 2.076e-09
C-terminus
sp_v3.0_unigene58800 SustainPine v3.0 240
AutoFact: ribonuclease G [Francisella tularensis subsp. holarctica LVS] ref|YP_764259.1| ribonuclease G [Francisella tularensis subsp. holarctica OSU18] ref|ZP_02276037.1| ribonuclease G [Francisella tularensis subsp. holarctica FSC200] ref|YP_001429513.2| ribonucl 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative ribonuclease E 2.032e-09
Internal
sp_v3.0_unigene61942 SustainPine v3.0 322
AutoFact: putative endoribonuclease E [Oryza sativa Japonica Group] 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative ribonuclease E 2.076e-09
Internal
sp_v3.0_unigene77195 SustainPine v3.0 206
AutoFact: RNAse E/G-like protein n=8 Tax=Arabidopsis RepID=F4IV66_ARATH 7.0e-12
FL-Next: tr=RNAse E/G-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative ribonuclease E 9.576e-10
Internal
sp_v3.0_unigene129105 SustainPine v3.0 402
AutoFact: RNAse E/G-like protein [Arabidopsis thaliana] gb|AAM13212.1| putative ribonuclease E [Arabidopsis thaliana] gb|AAP68232.1| At2g04270 [Arabidopsis thaliana] gb|AEC05814.1| RNAse E/G-like protein [Arabidopsis thaliana] 4.06377e-44
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Putative ribonuclease E 2.076e-09
Internal
sp_v3.0_unigene164320 SustainPine v3.0 344
AutoFact: Os08g0323600 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6Z0E3_ORYSJ 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain