Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SHP2, AGL5 K-box region and MADS-box transcription factor family protein chr2:17820602-17823806 FORWARD LENGTH=248

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene24196 SustainPine v3.0 1258
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 0.0
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 9.12e-31
Complete
sp_v3.0_unigene26344 SustainPine v3.0 1295
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 5.60519e-45
FL-Next: tr=Putative MADS domain transcription factor GGM10; Gnetum gnemon (Bago) (Gnetum acutatum). 0.0
Sma3: MADS-box transcription factor 1.008e-23
Complete
sp_v3.0_unigene27927 SustainPine v3.0 616
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 4.06377e-44
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 3.585e-28
N-terminus
sp_v3.0_unigene32115 SustainPine v3.0 767
AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 9.99995e-41
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 1.353e-40
Putative N-terminus
sp_v3.0_unigene32790 SustainPine v3.0 790
AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 0.0
FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: AGAMOUS-like protein 6.741e-26
N-terminus
sp_v3.0_unigene97073 SustainPine v3.0 272
AutoFact: MADS-domain protein DAL10 n=1 Tax=Picea abies RepID=Q71UQ7_PICAB 2.0e-15
FL-Next: tr=MADS-domain protein DAL10; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: MADS-box transcription factor 5.068e-26
N-terminus
sp_v3.0_unigene205307 SustainPine v3.0 507
AutoFact: Putative MADS domain transcription factor GGM3 n=1 Tax=Gnetum gnemon RepID=Q9XGK4_GNEGN 8.0e-31
FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
Sma3: AGAMOUS-like protein 1.614e-33
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain