Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Leucine-rich repeat (LRR) family protein chr3:8901154-8902638 REVERSE LENGTH=494

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3130 SustainPine v3.0 1552
• AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Extensin-like protein 5.36e-31
N-terminus
sp_v3.0_unigene10451 SustainPine v3.0 825
• AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Extensin-like protein 6.093e-31
Internal
sp_v3.0_unigene12676 SustainPine v3.0 698
• AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 6.0e-29
• FL-Next: sp=Leucine-rich repeat extensin-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin-like protein 6.964e-16
N-terminus
sp_v3.0_unigene40653 SustainPine v3.0 414
• AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Extensin-like protein 7.47e-29
Putative N-terminus
sp_v3.0_unigene47366 SustainPine v3.0 178
• AutoFact: Leucine-rich repeat extensin-like protein 4 n=2 Tax=Arabidopsis RepID=LRX4_ARATH 4.0e-11
• FL-Next: sp=Leucine-rich repeat extensin-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene66016 SustainPine v3.0 263
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TBR2_VITVI 2.0e-10
• FL-Next: sp=Leucine-rich repeat extensin-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene95574 SustainPine v3.0 573
• AutoFact: leucine-rich repeat/extensin [Nicotiana plumbaginifolia] dbj|BAF48664.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Extensin-like protein 4.04e-31
Internal
sp_v3.0_unigene126176 SustainPine v3.0 582
• AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Extensin-like protein 3.313e-28
Internal
sp_v3.0_unigene140283 SustainPine v3.0 347
• AutoFact: Leucine-rich repeat extensin-like protein 4 n=2 Tax=Arabidopsis RepID=LRX4_ARATH 2.0e-26
• FL-Next: sp=Leucine-rich repeat extensin-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin-like protein 4.587e-09
Internal
sp_v3.0_unigene159487 SustainPine v3.0 189
• AutoFact: Leucine-rich repeat extensin-like protein 4 n=2 Tax=Arabidopsis RepID=LRX4_ARATH 6.0e-15
• FL-Next: sp=Leucine-rich repeat extensin-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin-like protein 1.504e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain