Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: CHUP1 Hydroxyproline-rich glycoprotein family protein chr3:9354061-9357757 FORWARD LENGTH=1004

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1179 SustainPine v3.0 1132
• AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 0.0
• FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplast unusual positioning 1B 1.082e-09
Internal
sp_v3.0_unigene5384 SustainPine v3.0 2204
• AutoFact: Spc7 multi-domain protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast unusual positioning 1B 2.848e-09
Complete
sp_v3.0_unigene5966 SustainPine v3.0 1086
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast unusual positioning 1B 3.622e-09
C-terminus
sp_v3.0_unigene8943 SustainPine v3.0 1833
• AutoFact: chloroplast unusual positioning 1A [Physcomitrella patens] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11109 SustainPine v3.0 873
• AutoFact: chloroplast unusual positioning 1A [Physcomitrella patens] 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene16734 SustainPine v3.0 541
• AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene27212 SustainPine v3.0 3903
• AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast unusual positioning 1A 2.694e-09
Complete
sp_v3.0_unigene50642 SustainPine v3.0 272
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast unusual positioning 1B 2.796e-09
Internal
sp_v3.0_unigene56887 SustainPine v3.0 296
• AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 1.0e-20
• FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene57815 SustainPine v3.0 320
• AutoFact: Chloroplast unusual positioning 1A n=1 Tax=Adiantum capillus-veneris RepID=B3IYT7_ADICA 2.0e-15
• FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplast unusual positioning 1B 1.544e-10
Internal
sp_v3.0_unigene80897 SustainPine v3.0 217
• AutoFact: Protein CHUP1, chloroplastic n=3 Tax=Arabidopsis RepID=CHUP1_ARATH 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81735 SustainPine v3.0 268
• AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 1.0e-30
• FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplast unusual positioning 1B 5.586e-10
Internal
sp_v3.0_unigene98783 SustainPine v3.0 436
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast unusual positioning 1B 1.318e-09
C-terminus
sp_v3.0_unigene98901 SustainPine v3.0 460
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast unusual positioning 1B 3.506e-09
Internal
sp_v3.0_unigene112918 SustainPine v3.0 265
• AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 1.0e-15
• FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene115794 SustainPine v3.0 402
• AutoFact: chloroplast unusual positioning 1A [Physcomitrella patens] 3.0e-18
• FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene124836 SustainPine v3.0 258
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast unusual positioning 1B 1.945e-09
Internal
sp_v3.0_unigene163002 SustainPine v3.0 194
• AutoFact: Protein CHUP1, chloroplastic n=3 Tax=Arabidopsis RepID=CHUP1_ARATH 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast unusual positioning 1B 2.694e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain