Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATRX P-loop containing nucleoside triphosphate hydrolases superfamily protein chr1:2724562-2733431 FORWARD LENGTH=1479

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene43350 SustainPine v3.0 140
• AutoFact: SNF2 family DNA-dependent ATPase domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RXS5_PHYPA 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene50850 SustainPine v3.0 230
• AutoFact: DEAD-like helicase domain-containing protein n=3 Tax=Arabidopsis RepID=F4HW52_ARATH 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene70967 SustainPine v3.0 144
• AutoFact: putative helicase [Oryza sativa Japonica Group] 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene95607 SustainPine v3.0 530
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene101320 SustainPine v3.0 1291
• AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SWI2/SNF2-like protein 2.197e-13
Putative C-terminus
sp_v3.0_unigene102844 SustainPine v3.0 446
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene111137 SustainPine v3.0 191
• AutoFact: DEAD-like helicase domain-containing protein [Arabidopsis thaliana] ref|NP_001184938.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] ref|NP_001184939.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] gb|AEE28314 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene111355 SustainPine v3.0 409
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene121930 SustainPine v3.0 350
• AutoFact: DEAD-like helicase domain-containing protein [Arabidopsis thaliana] ref|NP_001184938.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] ref|NP_001184939.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] gb|AEE28314 3.0e-37
• FL-Next: sp=DNA repair and recombination protein RAD54; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene160393 SustainPine v3.0 424
• AutoFact: SNF2_N domain containing protein 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene164103 SustainPine v3.0 218
• AutoFact: Putative helicase (Fragment) n=1 Tax=Arabidopsis thaliana RepID=O04048_ARATH 4.0e-09
• FL-Next: tr=ATRX/CHR20; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene164716 SustainPine v3.0 322
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain