Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: EMB25, PDE317, ISE2 DEAD/DEAH box helicase, putative chr1:26390016-26394148 REVERSE LENGTH=1171

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene14702 SustainPine v3.0 561
• AutoFact: DEAD-box ATP-dependent RNA helicase ISE2 [Arabidopsis thaliana] sp|B9DFG3.2|ISE2_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 25; AltName: Full=Protein INCREASED SIZE EXCLUSION LIMIT 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene21189 SustainPine v3.0 970
• AutoFact: [L] COG4581 Superfamily II RNA helicase 4.0e-12
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative helicase 1.251e-06
C-terminus
sp_v3.0_unigene53281 SustainPine v3.0 178
• AutoFact: Unassigned protein
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61064 SustainPine v3.0 124
• AutoFact: [L] COG4581 Superfamily II RNA helicase 3.0e-06
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene63472 SustainPine v3.0 178
• AutoFact: DEAD-box ATP-dependent RNA helicase ISE2 [Arabidopsis thaliana] sp|B9DFG3.2|ISE2_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 25; AltName: Full=Protein INCREASED SIZE EXCLUSION LIMIT 2 1.0e-16
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene77330 SustainPine v3.0 436
• AutoFact: Type III restriction enzyme, res subunit [Anabaena variabilis ATCC 29413] gb|ABA22513.1| Type III restriction enzyme, res subunit [Anabaena variabilis ATCC 29413] 9.00054e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Helicase, putative 8.404e-12
Putative N-terminus
sp_v3.0_unigene103473 SustainPine v3.0 214
• AutoFact: [L] COG4581 Superfamily II RNA helicase 3.0e-11
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121536 SustainPine v3.0 480
• AutoFact: [L] COG4581 Superfamily II RNA helicase 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain