Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATTAP1, TAP1 transporter associated with antigen processing protein 1 chr1:26622086-26626331 FORWARD LENGTH=700

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene13537 SustainPine v3.0 526
• AutoFact: ATP-binding cassette transporter, subfamily B, member 5, group TAP protein PpABCB5 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TQ95_PHYPA 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene52524 SustainPine v3.0 319
• AutoFact: putative ABC protein [Oryza sativa Japonica Group] 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Abc transporter, putative 7.313e-07
Internal
sp_v3.0_unigene99235 SustainPine v3.0 390
• AutoFact: Os01g0911300 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0JGQ4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene99403 SustainPine v3.0 348
• AutoFact: ATP-binding cassette transporter, subfamily B, member 6, group TAP protein PpABCB6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRT8_PHYPA 7.0e-18
• FL-Next: sp=ABC transporter B family member 26, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Abc transporter, putative 9.479e-07
Internal
sp_v3.0_unigene102917 SustainPine v3.0 516
• AutoFact: ATP-binding cassette transporter, subfamily B, member 5, group TAP protein PpABCB5 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TQ95_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Abc transporter, putative 8.361e-07
N-terminus
sp_v3.0_unigene138276 SustainPine v3.0 289
• AutoFact: ATP-binding cassette transporter, subfamily B, member 6, group TAP protein PpABCB6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRT8_PHYPA 8.0e-14
• FL-Next: sp=ABC transporter B family member 26, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene193677 SustainPine v3.0 421
• AutoFact: ATP-binding cassette transporter, subfamily B, member 6, group TAP protein PpABCB6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRT8_PHYPA 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain