Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ALS1, ATTAP2, TAP2 transporter associated with antigen processing protein 2 chr5:15625660-15629621 FORWARD LENGTH=644

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene19207 SustainPine v3.0 2756
AutoFact: putative ABC transporter [Hordeum vulgare subsp. vulgare] 0.0
FL-Next: sp=ABC transporter B family member 25; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Chromosome chr17 scaffold_101, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene41873 SustainPine v3.0 929
AutoFact: ABC transporter family protein (Fragment) n=3 Tax=Populus trichocarpa RepID=B9N4E9_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene57791 SustainPine v3.0 301
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RMN8_SELML 2.0e-14
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Putative C-terminus
sp_v3.0_unigene150106 SustainPine v3.0 338
AutoFact: ABC transporter related protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K449_DEHLB 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene158221 SustainPine v3.0 370
AutoFact: his-tagged-multidrug resistance glycoprotein MDR1 [synthetic construct] 2.0e-26
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain