Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit chr1:1350304-1355261 FORWARD LENGTH=1001

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene31342 SustainPine v3.0 463
• AutoFact: 26S proteasome regulatory subunit (Fragment) n=1 Tax=Gossypium hirsutum RepID=A6MUT2_GOSHI 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 1.157e-06
Internal
sp_v3.0_unigene51693 SustainPine v3.0 1112
• AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 1.208e-09
Putative C-terminus
sp_v3.0_unigene68358 SustainPine v3.0 335
• AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 8.0e-09
• FL-Next: tr=Os08g0224700 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene75965 SustainPine v3.0 417
• AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAF40455.1|AC004809_13 Strong similarity to the SEN3-like tRNA-processing protein F24L7.13 from A. thaliana gi|2914700 on BAC gb|AC003974. EST gb|AA712969 comes from this gene [Arabidopsis tha 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene137671 SustainPine v3.0 251
• AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 1.84e-06
Internal
sp_v3.0_unigene138083 SustainPine v3.0 359
• AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome regulatory complex component protein 9.077e-09
Internal
sp_v3.0_unigene144188 SustainPine v3.0 948
• AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 2.127e-09
Putative C-terminus
sp_v3.0_unigene152246 SustainPine v3.0 453
• AutoFact: PREDICTED: 26S proteasome non-ATPase regulatory subunit 1-like isoform 1 n=1 Tax=Acyrthosiphon pisum RepID=UPI0002061F0B 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 2.028e-09
Internal
sp_v3.0_unigene155027 SustainPine v3.0 353
• AutoFact: Putative 26S proteasome subunit RPN2a n=1 Tax=Capsicum chinense RepID=B1Q487_CAPCH 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome regulatory complex component protein 9.453e-09
Internal
sp_v3.0_unigene155391 SustainPine v3.0 333
• AutoFact: 26S proteasome non-ATPase regulatory subunit 1 [Gallus gallus] sp|Q5F418.1|PSMD1_CHICK RecName: Full=26S proteasome non-ATPase regulatory subunit 1; AltName: Full=26S proteasome regulatory subunit RPN2; AltName: Full=26S proteasome regulatory subunit S1 e 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene201706 SustainPine v3.0 275
• AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome regulatory complex component protein 7.483e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain