Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: EMB86, EMB1030, EMB263 Alanyl-tRNA synthetase, class IIc chr5:7616221-7619961 REVERSE LENGTH=978

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene6852 SustainPine v3.0 872
• AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene10130 SustainPine v3.0 416
• AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 5.99994e-41
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene53186 SustainPine v3.0 291
• AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 2.0e-13
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene54545 SustainPine v3.0 384
• AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
• Sma3: Alanyl-tRNA synthetase 1.63e-10
Internal
sp_v3.0_unigene69503 SustainPine v3.0 241
• AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 4.0e-18
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Putative C-terminus
sp_v3.0_unigene108483 SustainPine v3.0 492
• AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene112033 SustainPine v3.0 199
• AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 3.0e-14
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene148779 SustainPine v3.0 291
• AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 2.0e-18
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene195101 SustainPine v3.0 156
• AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 2.0e-08
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain