Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Small nuclear ribonucleoprotein family protein chr1:28854594-28855637 REVERSE LENGTH=98

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene151203 SustainPine v3.0 395
• AutoFact: U6 snRNA-associated Sm-like protein LSm3 n=26 Tax=Euteleostomi RepID=LSM3_HUMAN 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene152348 SustainPine v3.0 418
• AutoFact: PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Ciona intestinalis RepID=UPI000180CBAF 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sm-like protein 0.0
Complete
sp_v3.0_unigene154318 SustainPine v3.0 511
• AutoFact: U6 small nuclear ribonucleoprotein (Lsm3), putative n=2 Tax=Trichocomaceae RepID=B6Q9N7_PENMQ 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene165633 SustainPine v3.0 453
• AutoFact: U6 snRNA-associated Sm-like protein LSm3 [Aspergillus niger CBS 513.88] emb|CAK46655.1| unnamed protein product [Aspergillus niger] 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene188643 SustainPine v3.0 349
• AutoFact: LSM domain-containing protein n=1 Tax=Glomerella graminicola M1.001 RepID=E3Q2L4_COLGM 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene190107 SustainPine v3.0 340
• AutoFact: U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Osmerus mordax RepID=C1BKM3_OSMMO 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene191461 SustainPine v3.0 547
• AutoFact: U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Ectocarpus siliculosus RepID=D7FXS6_ECTSI 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene201655 SustainPine v3.0 660
• AutoFact: LSM domain-containing protein n=1 Tax=Glomerella graminicola M1.001 RepID=E3Q2L4_COLGM 9.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain