Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: TTN7, SMC3 Structural maintenance of chromosomes (SMC) family protein chr2:11609319-11617064 REVERSE LENGTH=1204

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5813 SustainPine v3.0 1075
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SMC3 protein 4.107e-09
N-terminus
sp_v3.0_unigene7237 SustainPine v3.0 2151
AutoFact: SMC_N multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SMC3 protein 3.564e-09
Putative Complete
sp_v3.0_unigene9429 SustainPine v3.0 844
AutoFact: SMC_hinge multi-domain protein 2.0e-19
FL-Next: sp=MAR-binding filament-like protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: SMC3 protein 1.945e-09
Internal
sp_v3.0_unigene57032 SustainPine v3.0 374
AutoFact: PREDICTED: similar to leucine zipper protein, partial [Strongylocentrotus purpuratus] ref|XP_001189267.1| PREDICTED: similar to leucine zipper protein, partial [Strongylocentrotus purpuratus] 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: SMC3 protein 7.054e-10
Internal
sp_v3.0_unigene60882 SustainPine v3.0 213
AutoFact: Unassigned protein
FL-Next: tr=Structural maintenance of chromosome, putative; Ricinus communis (Castor bean). 0.0
Sma3: SMC3 protein 1.05e-09
Internal
sp_v3.0_unigene153318 SustainPine v3.0 508
AutoFact: Structural maintenance of chromosomes protein 3 n=50 Tax=Euteleostomi RepID=SMC3_HUMAN 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SMC3 protein 3.168e-09
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain