Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transducin family protein / WD-40 repeat family protein chr4:2511212-2517052 REVERSE LENGTH=910

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene12850 SustainPine v3.0 1857
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene15756 SustainPine v3.0 928
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene41177 SustainPine v3.0 161
• AutoFact: [R] COG2319 FOG: WD40 repeat 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene43502 SustainPine v3.0 156
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 5.0e-17
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene46299 SustainPine v3.0 570
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T842_RICCO 0.0
• FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene52506 SustainPine v3.0 372
• AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-27
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene56082 SustainPine v3.0 446
• AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene73002 SustainPine v3.0 220
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene77192 SustainPine v3.0 212
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 2.0e-13
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene96909 SustainPine v3.0 230
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 2.0e-25
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene101009 SustainPine v3.0 365
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 7.0e-15
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene124430 SustainPine v3.0 208
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 9.0e-10
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene132263 SustainPine v3.0 247
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene143835 SustainPine v3.0 551
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL24132.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AAM20284.1| putative WD-repeat membrane protein [Arabidopsis thaliana] gb|AEE82445.1| transducin/WD40 domain-cont 2.0e-09
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene144318 SustainPine v3.0 509
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T842_RICCO 3.0e-40
• FL-Next: tr=Putative uncharacterized protein Sb10g025320; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
C-terminus
sp_v3.0_unigene183676 SustainPine v3.0 767
• AutoFact: WD-repeat protein, putative 1.00053e-42
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain