Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: PAA2 20S proteasome subunit PAA2 chr2:2234226-2236053 FORWARD LENGTH=246

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15687 SustainPine v3.0 1287
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NP38_PICSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene32405 SustainPine v3.0 912
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NP38_PICSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 0.0
C-terminus
sp_v3.0_unigene51291 SustainPine v3.0 165
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NP38_PICSI 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.269e-33
Internal
sp_v3.0_unigene79434 SustainPine v3.0 347
• AutoFact: Proteasome subunit alpha type n=1 Tax=Tuber melanosporum Mel28 RepID=D5GL27_TUBMM 8.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.055e-30
C-terminus
sp_v3.0_unigene129859 SustainPine v3.0 605
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NP38_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 7.55706e-41
Misassembled
sp_v3.0_unigene151326 SustainPine v3.0 292
• AutoFact: Proteasome subunit alpha type n=1 Tax=Selaginella moellendorffii RepID=D8T290_SELML 5.0e-32
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 0.0
Internal
sp_v3.0_unigene152201 SustainPine v3.0 323
• AutoFact: Proteasome subunit alpha type-6 n=37 Tax=Euteleostomi RepID=PSA6_HUMAN 2.0e-27
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 0.0
Internal
sp_v3.0_unigene155212 SustainPine v3.0 348
• AutoFact: Proteasome subunit alpha type n=1 Tax=Arthroderma otae CBS 113480 RepID=C5FD98_ARTOC 8.0e-33
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 7.49e-39
Internal
sp_v3.0_unigene158038 SustainPine v3.0 369
• AutoFact: PREDICTED: similar to Proteasome subunit alpha type 6 (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) isoform 4 n=2 Tax=Eutheria RepID=UPI00005A16D6 8.0e-35
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 7.28675e-44
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain