Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L4/L1 family chr3:2953813-2955444 FORWARD LENGTH=406

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene454 SustainPine v3.0 1808
• AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16907 SustainPine v3.0 1820
• AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25980 SustainPine v3.0 491
• AutoFact: 60S ribosomal protein L4 [Chlamydomonas sp. HS-5] 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene31502 SustainPine v3.0 585
• AutoFact: 60S ribosomal protein L4, putative n=1 Tax=Ricinus communis RepID=B9SGS2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.433e-16
Internal
sp_v3.0_unigene55579 SustainPine v3.0 319
• AutoFact: 60S ribosomal protein L4/L1/L2 n=1 Tax=Postia placenta Mad-698-R RepID=B8P757_POSPM 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.129e-16
Internal
sp_v3.0_unigene63219 SustainPine v3.0 247
• AutoFact: PREDICTED: similar to ribosomal protein L4 n=1 Tax=Nasonia vitripennis RepID=UPI00015B409C 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 3.703e-12
Internal
sp_v3.0_unigene71264 SustainPine v3.0 387
• AutoFact: Chain D, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|D Chain D, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 5.474e-17
Putative C-terminus
sp_v3.0_unigene76819 SustainPine v3.0 326
• AutoFact: Similar to 60S ribosomal protein L4 n=1 Tax=Leptosphaeria maculans RepID=E5AAJ6_LEPMC 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.382e-16
Internal
sp_v3.0_unigene78237 SustainPine v3.0 225
• AutoFact: RecName: Full=60S ribosomal protein L4; AltName: Full=L1 gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca] 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.358e-16
C-terminus
sp_v3.0_unigene127006 SustainPine v3.0 1157
• AutoFact: 60S ribosomal protein L4, putative n=1 Tax=Ricinus communis RepID=B9SGS2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 2.221e-16
Putative Complete
sp_v3.0_unigene127151 SustainPine v3.0 1747
• AutoFact: RecName: Full=60S ribosomal protein L4; AltName: Full=L1 gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene140652 SustainPine v3.0 562
• AutoFact: 60S ribosomal protein L4-1 [Arabidopsis thaliana] gb|AEE74790.1| 60S ribosomal protein L4-1 [Arabidopsis thaliana] 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 2.195e-12
C-terminus
sp_v3.0_unigene142906 SustainPine v3.0 231
• AutoFact: RecName: Full=60S ribosomal protein L4; AltName: Full=L1 gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: L1 1.327e-08
Internal
sp_v3.0_unigene152590 SustainPine v3.0 374
• AutoFact: 60S ribosomal protein L4-B (L1) [Arabidopsis thaliana] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene155721 SustainPine v3.0 229
• AutoFact: Ribosomal protein L4 (Fragment) n=1 Tax=Paramecium caudatum RepID=Q95YH2_PARCA 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 3.433e-12
Internal
sp_v3.0_unigene158334 SustainPine v3.0 504
• AutoFact: 60S ribosomal protein L4 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KDE5_PUCGT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.382e-16
Internal
sp_v3.0_unigene158760 SustainPine v3.0 354
• AutoFact: ribosomal protein L4/L1 family protein [Tetrahymena thermophila] gb|EAR97243.2| ribosomal protein L4/L1 family protein [Tetrahymena thermophila SB210] 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.433e-16
Internal
sp_v3.0_unigene159010 SustainPine v3.0 205
• AutoFact: RecName: Full=60S ribosomal protein L4; AltName: Full=L1 gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.046e-16
Internal
sp_v3.0_unigene159223 SustainPine v3.0 205
• AutoFact: 60s ribosomal protein L2 [Magnaporthe oryzae 70-15] gb|EDK03676.1| 60s ribosomal protein L2 [Magnaporthe oryzae 70-15] 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.286e-16
Internal
sp_v3.0_unigene186563 SustainPine v3.0 572
• AutoFact: putative 60S ribosomal protein L1 [Trifolium pratense] dbj|BAE71248.1| putative 60S ribosomal protein L1 [Trifolium pratense] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.309e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain