Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RAB1C, ATRAB1C, ATRABD2C RAB GTPase homolog 1C chr4:9773721-9775424 REVERSE LENGTH=202

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15942 SustainPine v3.0 1618
• AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene24537 SustainPine v3.0 709
• AutoFact: Ras-related protein Rab-1A n=52 Tax=Eukaryota RepID=RAB1A_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 1.338e-19
Complete
sp_v3.0_unigene35882 SustainPine v3.0 848
• AutoFact: Ras-related protein Rab-1A n=52 Tax=Eukaryota RepID=RAB1A_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene65872 SustainPine v3.0 173
• AutoFact: ras-related GTP binding protein possessing GTPase activity [Oryza sativa] 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 2.121e-08
Internal
sp_v3.0_unigene150788 SustainPine v3.0 298
• AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 2.582e-08
Internal
sp_v3.0_unigene151480 SustainPine v3.0 427
• AutoFact: Ras-like protein rasG n=7 Tax=Dictyosteliida RepID=RASG_DICDI 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151584 SustainPine v3.0 460
• AutoFact: Rab family small GTPase n=1 Tax=Naegleria gruberi RepID=D2VPN7_NAEGR 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ethylene-responsive small GTP-binding protein 1.864e-07
C-terminus
sp_v3.0_unigene152890 SustainPine v3.0 469
• AutoFact: GTP-binding protein o-rab1 n=1 Tax=Trichoplax adhaerens RepID=B3RKM7_TRIAD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 3.66e-20
C-terminus
sp_v3.0_unigene154252 SustainPine v3.0 408
• AutoFact: Rab-family small GTPase Rab1A n=1 Tax=Tetrahymena thermophila RepID=E1CAY1_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 1.905e-20
Putative N-terminus
sp_v3.0_unigene154678 SustainPine v3.0 483
• AutoFact: Rab-family small GTPase Rab1C n=1 Tax=Tetrahymena thermophila RepID=E1CAY3_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 4.266e-18
Putative N-terminus
sp_v3.0_unigene155431 SustainPine v3.0 281
• AutoFact: Ras-related protein ric1 (Fragment) n=2 Tax=Oryza sativa Indica Group RepID=A6N1N5_ORYSI 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 1.623e-08
Putative C-terminus
sp_v3.0_unigene158624 SustainPine v3.0 569
• AutoFact: RAS oncogene family member RAB1 n=1 Tax=Amblyomma variegatum RepID=F0J9Z3_AMBVA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 7.815e-20
N-terminus
sp_v3.0_unigene205555 SustainPine v3.0 575
• AutoFact: GTP-binding protein o-rab1 n=1 Tax=Trichoplax adhaerens RepID=B3RKM7_TRIAD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 1.372e-19
N-terminus
sp_v3.0_unigene205692 SustainPine v3.0 550
• AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain