Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: CRT1b, AtCRT1b calreticulin 1b chr1:2973217-2976655 REVERSE LENGTH=424

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16851 SustainPine v3.0 1838
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34104 SustainPine v3.0 1264
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 1.4013e-45
N-terminus
sp_v3.0_unigene79393 SustainPine v3.0 310
AutoFact: calreticulin [Arabidopsis thaliana] 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 5.701e-40
Misassembled
sp_v3.0_unigene127143 SustainPine v3.0 1079
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 1.26117e-44
Misassembled
sp_v3.0_unigene129133 SustainPine v3.0 453
AutoFact: PDR-like ABC-transporter n=1 Tax=Glycine max RepID=Q1M2R7_SOYBN 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 9.226e-34
Internal
sp_v3.0_unigene140527 SustainPine v3.0 1091
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 0.0
N-terminus
sp_v3.0_unigene142600 SustainPine v3.0 754
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 0.0
N-terminus
sp_v3.0_unigene142900 SustainPine v3.0 466
AutoFact: calreticulin [Arabidopsis thaliana] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 2.67648e-43
Misassembled
sp_v3.0_unigene153391 SustainPine v3.0 287
AutoFact: Calreticulin, putative n=4 Tax=Entamoeba RepID=B0ETB7_ENTDI 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 7.00649e-45
Internal
sp_v3.0_unigene154146 SustainPine v3.0 244
AutoFact: Calreticulin n=1 Tax=Ectocarpus siliculosus RepID=D7FZD0_ECTSI 4.0e-29
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Sma3: Calreticulin 2.239e-22
Internal
sp_v3.0_unigene154553 SustainPine v3.0 426
AutoFact: Calreticulin, putative n=5 Tax=Trypanosoma brucei RepID=D6XEQ8_TRYB2 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene156748 SustainPine v3.0 287
AutoFact: Calreticulin (Fragment) n=2 Tax=Triticeae RepID=Q40041_HORVU 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 1.4013e-45
Internal
sp_v3.0_unigene157630 SustainPine v3.0 335
AutoFact: Calreticulin n=1 Tax=Polysphondylium pallidum RepID=D3BIF1_POLPA 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 2.52234e-44
Internal
sp_v3.0_unigene208490 SustainPine v3.0 1446
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain