Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Coatomer, beta subunit chr4:15269460-15272693 FORWARD LENGTH=948

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene62878 SustainPine v3.0 243
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 1.0e-17
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.042e-12
Internal
sp_v3.0_unigene64812 SustainPine v3.0 130
AutoFact: Beta-COP-like protein [Arabidopsis thaliana] emb|CAB79867.1| Beta-COP-like protein [Arabidopsis thaliana] 1.0e-08
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta-2 6.743e-09
Internal
sp_v3.0_unigene67442 SustainPine v3.0 167
AutoFact: Unassigned protein
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta-2 4.107e-09
Internal
sp_v3.0_unigene149065 SustainPine v3.0 246
AutoFact: Coatomer subunit beta, putative n=1 Tax=Ricinus communis RepID=B9RNM4_RICCO 3.0e-32
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.134e-12
N-terminus
sp_v3.0_unigene159466 SustainPine v3.0 430
AutoFact: Beta-COP-like protein [Arabidopsis thaliana] emb|CAB79867.1| Beta-COP-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.39e-12
Internal
sp_v3.0_unigene167172 SustainPine v3.0 128
AutoFact: Adaptin N terminal region, putative [Oryza sativa Japonica Group] gb|AAX95779.1| Adaptin N terminal region, putative [Oryza sativa Japonica Group] gb|ABA91741.1| Adaptin N terminal region family protein, expressed [Oryza sativa Japonica Group] 2.0e-13
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 8.582e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain