Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: emb1624 Translation initiation factor IF6 chr3:20634581-20636312 FORWARD LENGTH=245

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene11072 SustainPine v3.0 1449
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34869 SustainPine v3.0 1458
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene36537 SustainPine v3.0 359
• AutoFact: Chain A, Crystal Structure Of S.Cerevisiae Eif6 pdb|2X7N|B Chain B, Mechanism Of Eif6s Anti-Association Activity 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.207e-08
N-terminus
sp_v3.0_unigene37351 SustainPine v3.0 1565
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene44871 SustainPine v3.0 1436
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene52985 SustainPine v3.0 365
• AutoFact: Translation initiation factor IF6 [Arabidopsis thaliana] sp|Q9M060.1|IF62_ARATH RecName: Full=Eukaryotic translation initiation factor 6-2; Short=AteIF-6;2 emb|CAB81587.1| eukaryotic translation initiation factor 6 (EIF-6)-like protein [Arabidopsis thalia 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 6.985e-08
Putative N-terminus
sp_v3.0_unigene55181 SustainPine v3.0 488
• AutoFact: Translation initiation factor IF6 [Arabidopsis thaliana] sp|Q9M060.1|IF62_ARATH RecName: Full=Eukaryotic translation initiation factor 6-2; Short=AteIF-6;2 emb|CAB81587.1| eukaryotic translation initiation factor 6 (EIF-6)-like protein [Arabidopsis thalia 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.099e-24
N-terminus
sp_v3.0_unigene57622 SustainPine v3.0 349
• AutoFact: Translation initiation factor IF6 [Arabidopsis thaliana] sp|Q9M060.1|IF62_ARATH RecName: Full=Eukaryotic translation initiation factor 6-2; Short=AteIF-6;2 emb|CAB81587.1| eukaryotic translation initiation factor 6 (EIF-6)-like protein [Arabidopsis thalia 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 4.533e-24
N-terminus
sp_v3.0_unigene77328 SustainPine v3.0 304
• AutoFact: Translation initiation factor IF6 [Arabidopsis thaliana] sp|Q9M060.1|IF62_ARATH RecName: Full=Eukaryotic translation initiation factor 6-2; Short=AteIF-6;2 emb|CAB81587.1| eukaryotic translation initiation factor 6 (EIF-6)-like protein [Arabidopsis thalia 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 8.392e-12
C-terminus
sp_v3.0_unigene144205 SustainPine v3.0 825
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.099e-24
N-terminus
sp_v3.0_unigene144578 SustainPine v3.0 830
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.099e-24
N-terminus
sp_v3.0_unigene148549 SustainPine v3.0 427
• AutoFact: putative eukaryotic translation initiation factor 6 [Trifolium pratense] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.099e-24
Internal
sp_v3.0_unigene164687 SustainPine v3.0 177
• AutoFact: eukaryotic translation initiation factor 6 [Gallus gallus] emb|CAG31501.1| hypothetical protein RCJMB04_7b21 [Gallus gallus] 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 4.525e-08
Internal
sp_v3.0_unigene166721 SustainPine v3.0 536
• AutoFact: Eukaryotic translation initiation factor 6 n=3 Tax=Agaricomycetes RepID=A8NUF7_COPC7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.099e-24
Putative C-terminus
sp_v3.0_unigene199775 SustainPine v3.0 323
• AutoFact: putative eukaryotic translation initiation factor 6 [Trifolium pratense] 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 6 5.099e-24
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain