Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: emb2444 RNA-binding (RRM/RBD/RNP motifs) family protein chr2:8031554-8033517 REVERSE LENGTH=363

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene29181 SustainPine v3.0 1707
AutoFact: splicing factor 3B subunit 4 [Arabidopsis thaliana] gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana] gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana] gb|AEC06776.1| splicing factor 3B subunit 4 [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_32, whole genome shotgun sequence 0.0
Putative Complete
sp_v3.0_unigene74117 SustainPine v3.0 376
AutoFact: Splicing factor 3b subunit 4 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NHJ0_COPC7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative spliceosome associated protein 1.283e-08
Putative N-terminus
sp_v3.0_unigene135864 SustainPine v3.0 253
AutoFact: putative spliceosome associated protein [Arabidopsis thaliana] 5.0e-22
FL-Next: tr=Glycine-rich RNA-binding protein; Sequoia sempervirens (California redwood) (Taxodium sempervirens). 0.0
Sma3: Putative spliceosome associated protein 1.18e-08
Putative N-terminus
sp_v3.0_unigene155686 SustainPine v3.0 439
AutoFact: splicing factor 3b, subunit 4, 49kDa [Xenopus laevis] gb|AAH45264.1| Spx-prov protein [Xenopus laevis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative spliceosome associated protein 1.318e-08
Internal
sp_v3.0_unigene200368 SustainPine v3.0 438
AutoFact: Spliceosome associated protein, putative n=1 Tax=Ricinus communis RepID=B9RRM5_RICCO 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative spliceosome associated protein 1.147e-08
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain