Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S3Ae chr3:1329751-1331418 FORWARD LENGTH=262

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene145718 SustainPine v3.0 716
AutoFact: RecName: Full=40S ribosomal protein S3a emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 1.5e-24
Misassembled
sp_v3.0_unigene145808 SustainPine v3.0 426
AutoFact: 40S ribosomal protein S3a (Fragment) n=1 Tax=Pseudotsuga menziesii var. menziesii RepID=Q5MEK4_PSEMZ 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 0.0
C-terminus
sp_v3.0_unigene145911 SustainPine v3.0 569
AutoFact: RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein cyc07 gb|ABA41527.1| cyc07 [Nicotiana tabacum] 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 9.573e-25
C-terminus
sp_v3.0_unigene150353 SustainPine v3.0 288
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 3.295e-17
Putative C-terminus
sp_v3.0_unigene151728 SustainPine v3.0 212
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 7.221e-21
Internal
sp_v3.0_unigene153645 SustainPine v3.0 373
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 6.703e-21
Putative C-terminus
sp_v3.0_unigene157333 SustainPine v3.0 316
AutoFact: 40S ribosomal protein S3a putative n=1 Tax=Albugo laibachii Nc14 RepID=F0W988_9STRA 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene190437 SustainPine v3.0 417
AutoFact: Ribosomal protein S3a n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C281_9EUKA 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 3.295e-17
C-terminus
sp_v3.0_unigene210272 SustainPine v3.0 246
AutoFact: 40S ribosomal protein S3a-1 [Arabidopsis thaliana] sp|Q9CAV0.3|RS3A1_ARATH RecName: Full=40S ribosomal protein S3a-1 gb|AAG51414.1|AC009465_14 putative 40S ribosomal protein S3A (S phase specific); 75194-73527 [Arabidopsis thaliana] gb|AAL32874.1| putativ 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 1.041e-24
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain