Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RPS6, RPS6A ribosomal protein S6 chr4:15346306-15347714 REVERSE LENGTH=250

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2049 SustainPine v3.0 1218
• AutoFact: 40S ribosomal protein S6 n=7 Tax=Spermatophyta RepID=RS6_ASPOF 0.0
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17539 SustainPine v3.0 1341
• AutoFact: 40S ribosomal protein S6 n=7 Tax=Spermatophyta RepID=RS6_ASPOF 0.0
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23933 SustainPine v3.0 550
• AutoFact: 40S ribosomal protein S6 n=1 Tax=Triatoma matogrossensis RepID=E2J7D8_9HEMI 0.0
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 3.184e-15
Internal
sp_v3.0_unigene31446 SustainPine v3.0 818
• AutoFact: 40S ribosomal protein S6 n=62 Tax=Euteleostomi RepID=RS6_HUMAN 0.0
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 3.184e-15
Putative Complete
sp_v3.0_unigene35829 SustainPine v3.0 480
• AutoFact: 40S ribosomal protein S6 n=1 Tax=Trichoplax adhaerens RepID=B3RSK1_TRIAD 0.0
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 3.184e-15
N-terminus
sp_v3.0_unigene77140 SustainPine v3.0 122
• AutoFact: 40S ribosomal protein S6 n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y811_CLAL4 2.0e-08
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene142958 SustainPine v3.0 247
• AutoFact: Ribosomal s6 RPS6-2 family protein (Fragment) n=12 Tax=Musaceae RepID=D9I804_MUSAC 2.0e-17
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S6 9.654e-08
Internal
sp_v3.0_unigene152114 SustainPine v3.0 454
• AutoFact: PREDICTED: similar to ribosomal protein S6 n=1 Tax=Nasonia vitripennis RepID=UPI00015B4A7C 9.80909e-45
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 3.184e-15
Internal
sp_v3.0_unigene155724 SustainPine v3.0 365
• AutoFact: 40S ribosomal protein S6 n=4 Tax=Obtectomera RepID=RS6_MANSE 2.0e-35
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 3.184e-15
Internal
sp_v3.0_unigene157523 SustainPine v3.0 271
• AutoFact: 40S ribosomal protein S6 n=1 Tax=Aplysia californica RepID=RS6_APLCA 4.0e-24
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 2.391e-11
Internal
sp_v3.0_unigene158560 SustainPine v3.0 368
• AutoFact: 40S ribosomal protein S6 putative n=4 Tax=Albugo laibachii Nc14 RepID=F0WPD0_9STRA 0.0
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 3.863e-19
N-terminus
sp_v3.0_unigene167459 SustainPine v3.0 304
• AutoFact: 40S ribosomal protein S6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8QGN2_SCHCM 7.0e-31
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S6 3.072e-11
N-terminus
sp_v3.0_unigene186046 SustainPine v3.0 647
• AutoFact: 40S ribosomal protein S6 n=1 Tax=Ectocarpus siliculosus RepID=D7G827_ECTSI 0.0
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 3.184e-15
C-terminus
sp_v3.0_unigene192182 SustainPine v3.0 301
• AutoFact: 40S ribosomal protein S6 n=1 Tax=Artemia franciscana RepID=A7L6A4_ARTSF 5.0e-32
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 5.46e-15
N-terminus
sp_v3.0_unigene205728 SustainPine v3.0 397
• AutoFact: 40S ribosomal protein S6 n=1 Tax=Tuber melanosporum Mel28 RepID=D5G4Z3_TUBMM 3.0e-34
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 2.391e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain