Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L18ae/LX family protein chr1:10498458-10499373 REVERSE LENGTH=178

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene23185 SustainPine v3.0 634
AutoFact: S60 ribosomal protein L18a n=1 Tax=Polysphondylium pallidum RepID=D3B5J6_POLPA 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 3.829e-13
Complete
sp_v3.0_unigene23301 SustainPine v3.0 565
AutoFact: S60 ribosomal protein L18a n=1 Tax=Polysphondylium pallidum RepID=D3B5J6_POLPA 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 3.314e-13
Putative Complete
sp_v3.0_unigene24528 SustainPine v3.0 514
AutoFact: 60S ribosomal protein L18a n=2 Tax=Dictyostelium RepID=RL18A_DICDI 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 3.829e-13
Putative Complete
sp_v3.0_unigene25868 SustainPine v3.0 547
AutoFact: 60S ribosomal protein L18a n=2 Tax=Dictyostelium RepID=RL18A_DICDI 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.976e-13
Complete
sp_v3.0_unigene26526 SustainPine v3.0 430
AutoFact: Ribosomal protein L18a (Fragment) n=1 Tax=Podocoryna carnea RepID=O76968_PODCA 1.0e-35
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.785e-13
C-terminus
sp_v3.0_unigene27333 SustainPine v3.0 600
AutoFact: Ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus RepID=D8LL36_ECTSI 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 3.752e-13
Complete
sp_v3.0_unigene31925 SustainPine v3.0 726
AutoFact: 60S ribosomal protein L18a n=2 Tax=Phytophthora infestans RepID=D0NTC7_PHYIT 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18 0.0
Complete
sp_v3.0_unigene35876 SustainPine v3.0 604
AutoFact: Ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus RepID=D8LL36_ECTSI 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 3.829e-13
Complete
sp_v3.0_unigene77516 SustainPine v3.0 302
AutoFact: 60S ribosomal protein L18a-1 n=2 Tax=Arabidopsis RepID=A8MRF3_ARATH 4.00001e-40
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 4.479e-13
Internal
sp_v3.0_unigene150233 SustainPine v3.0 410
AutoFact: Ribosomal protein L18a n=1 Tax=Polypedilum vanderplanki RepID=C9K4N1_POLVA 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.543e-13
C-terminus
sp_v3.0_unigene151768 SustainPine v3.0 314
AutoFact: 60S ribosomal protein L18a n=2 Tax=Dictyostelium RepID=RL18A_DICDI 6.0e-23
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L18a 8.698e-08
C-terminus
sp_v3.0_unigene154519 SustainPine v3.0 433
AutoFact: 60S ribosomal protein L18a putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM08_9STRA 1.00053e-42
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.662e-13
C-terminus
sp_v3.0_unigene154830 SustainPine v3.0 399
AutoFact: Putative ribosomal protein L18A n=1 Tax=Maconellicoccus hirsutus RepID=A2I3U8_MACHI 6.0e-38
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RL18a, ribosomal protein 18a 60S large ribosomal subunit 7.31e-06
C-terminus
sp_v3.0_unigene159163 SustainPine v3.0 324
AutoFact: Ribosomal L18ae protein family protein n=1 Tax=Tetrahymena thermophila RepID=UPI000150A04D 1.0e-16
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene190455 SustainPine v3.0 423
AutoFact: 60S ribosomal protein L18a n=5 Tax=core eudicotyledons RepID=RL18A_CASSA 1.0e-32
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 2.976e-13
C-terminus
sp_v3.0_unigene191027 SustainPine v3.0 480
AutoFact: 60S ribosomal protein L18a n=14 Tax=Schizophora RepID=RL18A_DROME 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 4.503e-09
N-terminus
sp_v3.0_unigene203010 SustainPine v3.0 635
AutoFact: S60 ribosomal protein L18a n=1 Tax=Polysphondylium pallidum RepID=D3B5J6_POLPA 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 3.829e-13
Complete
sp_v3.0_unigene203669 SustainPine v3.0 535
AutoFact: 60S ribosomal protein L18a n=2 Tax=Phytophthora infestans RepID=D0NTC7_PHYIT 0.0
FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L18a 4.479e-13
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain