Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: " RGD3 DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases chr3:20092361-20104153 FORWARD LENGTH=2129"

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6591 SustainPine v3.0 1352
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9I6D4_POPTR 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Chromosome chr6 scaffold_28, whole genome shotgun sequence 7.264e-06
N-terminus
sp_v3.0_unigene9944 SustainPine v3.0 309
AutoFact: DUF3535 domain containing protein 4.0e-12
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene10080 SustainPine v3.0 970
AutoFact: DUF3535 domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: SNF2 super family 2.192e-06
Internal
sp_v3.0_unigene12383 SustainPine v3.0 890
AutoFact: TATA-binding protein-associated factor MOT1, putative n=1 Tax=Ricinus communis RepID=B9SD95_RICCO 0.0
FL-Next: tr=TATA-binding protein-associated factor MOT1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene12523 SustainPine v3.0 591
AutoFact: Putative SNF2 domain-containing protein n=2 Tax=Oryza sativa RepID=Q6H7U1_ORYSJ 0.0
FL-Next: sp=Putative chromatin-remodeling complex ATPase chain; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2 super family 2.889e-06
Internal
sp_v3.0_unigene37081 SustainPine v3.0 1793
AutoFact: TATA box binding protein (TBP) associated factor (TAF)-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 superfamily protein 1.226e-07
Putative C-terminus
sp_v3.0_unigene60682 SustainPine v3.0 129
AutoFact: TATA-binding protein-associated factor MOT1, putative n=1 Tax=Ricinus communis RepID=B9SD95_RICCO 2.0e-14
FL-Next: tr=TATA-binding protein-associated factor MOT1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene75952 SustainPine v3.0 327
AutoFact: SNF2 superfamily chromatin remodeling protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D3Q8_LACBS 4.0e-36
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2 super family 2.68e-06
Internal
sp_v3.0_unigene160712 SustainPine v3.0 472
AutoFact: SNF2 superfamily chromatin remodeling protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFY1_PHYPA 1.0e-20
FL-Next: tr=SNF2 superfamily chromatin remodeling protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: SNF2 super family 1.631e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain