Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: PAB1 proteasome subunit PAB1 chr1:5623122-5625439 FORWARD LENGTH=235

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene140916 SustainPine v3.0 115
• AutoFact: proteasome subunit alpha type-2-B [Arabidopsis thaliana] ref|NP_001077845.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana] ref|NP_001077846.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana] sp|Q8L4A7.1|PSA2B_ARATH RecName: Full=Protea 2.0e-08
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.952e-10
Internal
sp_v3.0_unigene150356 SustainPine v3.0 445
• AutoFact: Alpha 2 subunit of 20S proteasome (ISS) n=2 Tax=Ostreococcus RepID=Q017X9_OSTTA 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.247e-10
C-terminus
sp_v3.0_unigene151590 SustainPine v3.0 198
• AutoFact: alpha 2 subunit of 20S proteasome (ISS) [Ostreococcus tauri] emb|CAL53282.1| alpha 2 subunit of 20S proteasome (ISS) [Ostreococcus tauri] 2.0e-21
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.325e-10
Internal
sp_v3.0_unigene154193 SustainPine v3.0 471
• AutoFact: Proteasome subunit alpha type 2 n=1 Tax=Culex quinquefasciatus RepID=B0WJV9_CULQU 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.247e-10
C-terminus
sp_v3.0_unigene156369 SustainPine v3.0 296
• AutoFact: Proteasome subunit alpha type n=2 Tax=Chlamydomonadales RepID=A8JEW4_CHLRE 1.0e-27
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 6.335e-13
N-terminus
sp_v3.0_unigene157678 SustainPine v3.0 136
• AutoFact: Proteasome subunit alpha type n=2 Tax=Entamoeba RepID=B0EPR2_ENTDI 5.0e-11
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 5.406e-13
N-terminus
sp_v3.0_unigene158899 SustainPine v3.0 142
• AutoFact: Proteasome subunit alpha type n=2 Tax=core eudicotyledons RepID=Q38HU2_SOLTU 1.0e-09
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158902 SustainPine v3.0 471
• AutoFact: proteasome subunit alpha type-2-B [Arabidopsis thaliana] ref|NP_001077845.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana] ref|NP_001077846.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana] sp|Q8L4A7.1|PSA2B_ARATH RecName: Full=Protea 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.095e-10
C-terminus
sp_v3.0_unigene159229 SustainPine v3.0 223
• AutoFact: Proteasome subunit alpha type n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RC85_PHYPA 4.0e-18
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 6.335e-13
N-terminus
sp_v3.0_unigene166727 SustainPine v3.0 370
• AutoFact: Proteasome subunit alpha type n=2 Tax=Agaricales RepID=B0CY33_LACBS 5.99756e-43
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 6.335e-13
N-terminus
sp_v3.0_unigene186435 SustainPine v3.0 436
• AutoFact: Proteasome subunit alpha type n=1 Tax=Chlorella variabilis RepID=E1ZCR2_9CHLO 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 6.845e-13
N-terminus
sp_v3.0_unigene199714 SustainPine v3.0 350
• AutoFact: alpha 2 subunit of 20S proteasome (ISS) [Ostreococcus tauri] emb|CAL53282.1| alpha 2 subunit of 20S proteasome (ISS) [Ostreococcus tauri] 4.0e-39
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 2.095e-10
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain