Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: DEA(D/H)-box RNA helicase family protein chr5:1428796-1434516 FORWARD LENGTH=1161

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1566 SustainPine v3.0 1672
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.085e-09
C-terminus
sp_v3.0_unigene15851 SustainPine v3.0 631
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.085e-09
Internal
sp_v3.0_unigene16754 SustainPine v3.0 648
AutoFact: ATP-dependent RNA helicase A-like protein n=2 Tax=Arabidopsis RepID=Q9FF84_ARATH 4.0e-24
FL-Next: tr=ATP-dependent RNA helicase A-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
N-terminus
sp_v3.0_unigene28941 SustainPine v3.0 642
AutoFact: putative helicase [Oryza sativa Japonica Group] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene41956 SustainPine v3.0 277
AutoFact: putative helicase [Oryza sativa Japonica Group] 3.0e-15
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene45677 SustainPine v3.0 170
AutoFact: putative helicase [Oryza sativa Japonica Group] 9.0e-24
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.937e-09
Internal
sp_v3.0_unigene56830 SustainPine v3.0 496
AutoFact: DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] dbj|BAB11511.1| ATP-dependent RNA helicase A-like protein [Arabidopsis thaliana] gb|AED90801.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.686e-09
Putative N-terminus
sp_v3.0_unigene60505 SustainPine v3.0 116
AutoFact: Putative helicase n=1 Tax=Oryza sativa RepID=Q8W302_ORYSA 2.0e-13
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.982e-09
Internal
sp_v3.0_unigene61192 SustainPine v3.0 405
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Sma3: ATP-dependent RNA helicase, putative 6.453e-09
Internal
sp_v3.0_unigene61587 SustainPine v3.0 267
AutoFact: PREDICTED: similar to DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57, partial [Strongylocentrotus purpuratus] 7.0e-10
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62181 SustainPine v3.0 214
AutoFact: putative helicase [Oryza sativa Japonica Group] 7.0e-31
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative RNA helicase A 2.414e-11
Internal
sp_v3.0_unigene63305 SustainPine v3.0 169
AutoFact: ATP-dependent RNA helicase A-like protein n=2 Tax=Arabidopsis RepID=Q9FF84_ARATH 3.0e-14
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.145e-09
Internal
sp_v3.0_unigene78363 SustainPine v3.0 158
AutoFact: putative helicase [Oryza sativa Japonica Group] 3.0e-11
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene79551 SustainPine v3.0 261
AutoFact: putative helicase [Oryza sativa Japonica Group] 3.99931e-42
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.182e-11
Internal
sp_v3.0_unigene81598 SustainPine v3.0 135
AutoFact: putative helicase [Oryza sativa Japonica Group] 2.0e-10
FL-Next: tr=ATP-dependent RNA helicase A-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene148679 SustainPine v3.0 209
AutoFact: putative helicase [Oryza sativa Japonica Group] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.916e-06
Internal
sp_v3.0_unigene162645 SustainPine v3.0 332
AutoFact: DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] dbj|BAB11511.1| ATP-dependent RNA helicase A-like protein [Arabidopsis thaliana] gb|AED90801.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: ATP-dependent RNA helicase, putative 8.574e-07
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain